Managing credits accurately is essential for clean books and reliable financial reporting. In QuickBooks, a credit memo is typically applied to an invoice to reduce a customer’s balance. However, there are situations where a credit memo needs to be unapplied—perhaps it was applied to the wrong invoice, the customer requested a refund instead, or an adjustment is required after reconciliation. This in-depth guide explains how to unapply a credit memo in QuickBooks, why you might need to do it, and best practices to avoid common mistakes.
If at any point you need expert assistance, QuickBooks specialists are available at +1-866-408-0444.

What Is a Credit Memo in QuickBooks?
A credit memo in QuickBooks is a document that reduces the amount a customer owes. It is often used when:
A customer returns items
An overcharge needs correction
A discount is granted after invoicing
Services were canceled or partially completed
Once created, a credit memo can be applied to an open invoice or left unapplied as a credit balance on the customer’s account. Problems arise when a credit memo is applied incorrectly or prematurely.
Why You May Need to Unapply a Credit Memo
Unapplying a credit memo is not uncommon. Some typical reasons include:
Incorrect Application – The credit memo was applied to the wrong invoice.
Refund Instead of Credit – The customer prefers a refund rather than an account credit.
Reversal of Adjustment – The credit was issued in error and needs correction.
Reconciliation Issues – The applied credit is causing mismatches during reconciliation.
Reporting Accuracy – Financial reports reflect inaccurate balances due to misapplied credits.
Understanding the reason helps you choose the correct unapplication method.
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Before You Begin: Important Precautions
Before unapplied any credit memo, keep these best practices in mind:
Back up your company file (especially in QuickBooks Desktop).
Review the customer’s transaction history to understand how the credit affects balances.
Check accounting periods to ensure you’re not modifying closed periods.
Consult your accountant if the credit affects prior tax filings.
These steps help prevent accidental data inconsistencies.
How to Unapply a Credit Memo in QuickBooks Online
Follow these steps carefully:
Step 1: Open the Customer’s Profile
Go to Sales from the left menu.
Select Customers.
Click on the customer whose credit memo was applied.
Step 2: Locate the Applied Credit Memo
Scroll through the transaction list.
Find the credit memo that shows as applied to an invoice.
Click on the credit memo to open it.
Step 3: Unapply the Credit
Within the credit memo, look for the linked invoice under the Applied to section.
Select More or Edit (depending on your QuickBooks version).
Remove the checkmark or unlink the invoice.
Save the transaction.
Once saved, the credit memo becomes unapplied and will show as an open credit on the customer’s account.
Learn More:- Memorized Transactions in QuickBooks
How to Unapply a Credit Memo in QuickBooks Desktop
The steps in QuickBooks Desktop are slightly different:
Step 1: Go to Receive Payments
Click Customers from the top menu.
Select Receive Payments.
Choose the correct customer.
Step 2: Review Applied Credits
You will see a list of invoices and credits.
Find the credit memo that is applied.
Step 3: Remove the Application
Uncheck the invoice that the credit memo is applied to.
Ensure the credit is no longer linked.
Click Save & Close.
This will return the credit memo to an unapplied status.
What Happens After You Unapply a Credit Memo?
After unapplying a credit memo:
The original invoice balance increases again.
The customer shows an available credit balance.
Reports such as Accounts Receivable and Customer Balance Summary update automatically.
You can decide whether to reapply the credit, issue a refund, or leave it as an open credit.
Always recheck reports to confirm balances are accurate.
How to Reapply or Refund the Credit Memo
Once unapplied, you have options:
Reapply the Credit
Apply it to the correct invoice using Receive Payment (Desktop) or Apply Credit (Online).
Issue a Refund
Go to Expense or Refund Receipt.
Select the customer and apply the credit as a refund.
This flexibility ensures customer satisfaction and accurate accounting.
Common Mistakes to Avoid
Deleting instead of unapplying: Deleting a credit memo can distort historical records.
Editing closed periods: This may cause compliance issues.
Ignoring linked transactions: Always check if the credit memo affects payments or deposits.
Not documenting changes: Add notes for audit clarity.
Avoiding these mistakes keeps your books audit-ready.
Best Practices for Managing Credit Memos
Apply credits promptly and correctly.
Reconcile customer accounts monthly.
Maintain clear documentation for every credit adjustment.
Train staff on proper credit memo workflows.
If you frequently deal with complex credit issues, professional guidance can save time and prevent errors.
When to Seek Professional Help
If unapplying a credit memo impacts multiple invoices, reconciliations, or prior accounting periods, it’s wise to consult a QuickBooks expert. Professional support ensures your financial data remains accurate and compliant. You can reach certified QuickBooks support at +1-866-408-0444 for personalized assistance.
Conclusion
Unapplying a credit memo in QuickBooks is a straightforward process when done correctly, but it requires attention to detail. Whether you’re correcting an error, issuing a refund, or cleaning up customer balances, following the proper steps ensures accurate records and trustworthy financial reports. By understanding when and how to unapply a credit memo—and by following best practices—you can keep your QuickBooks data organized, transparent, and audit-ready.